Correlation results summary in approach I from SMT
The excel file of Table 11 can be downloaded by clicking here
Approach | Tissue | Cluster | Cluster size | Hubs (first 15) | Risk correlation | Protection correlation | Cluster satisfying quality criteria |
---|---|---|---|---|---|---|---|
I | SMT | light-green | 1680 | MMP14, YBX1, UBE2B, RAB3IL1, SNAI1, FNIP1, BMP7, SERPINE1, ASB6, VAMP4, FAM99B, SHROOM1, CLTA, ASB4, CADM4 | Pathology*, BMI, BMI Z-score | Yes (protection) | |
I | SMT | midnight-blue | 170 | Apo-A**, HDL-c | Pathology | - | |
I | SMT | dark-red | 139 | LOC101927870, SCRN3, PI3, HGF, PHF21A, EPB41L4A-DT, MYADM, PARVA, LINC01554, USP28, NSUN4, MAGOHB, TNRC18, DNAH9, RXRG | Pathology, Glucose, QUICKI | Yes (protection) | |
I | SMT | purple | 3209 | ZPBP2, PRKCQ-AS1, ECHDC3, LSM10, PAQR8, IGKC, CFLAR, SIK2, FOSL2, RSPO3, FLVCR1-DT, SEPT9, YPEL2, C21orf91, PPP2R1A | Pathology, BMI Z-score | Yes (protection) | |
I | SMT | green-yellow | 229 | IRAK1BP1, METTL8, GPC6, SLC35G2, PTPN7, TCOF1, PAICS, NNMT, UBA6, PKD1P1|PKD1P6, RAVER2, PLA2G2A, NSUN3, CCDC69, CD14 | Pathology*, BMI, BMI Z-score | Yes (protection) | |
I | SMT | dark-green | 464 | RIPK1, CFLAR, MAP2K3, ATF2, CCL5, ABHD5, FABP4, AKT3 | Pathology | Yes (protection) | |
I | SMT | blue | 317 | - | |||
I | SMT | black | 192 | ESPL1, TPT1-AS1, TES, C11orf21, PROKR2, CDH22, MIR636|SRSF2, B4GALT6, HMGB3, GPR155, BLVRA, SMPDL3B, GOSR2, ILF3, USP37 | Pathology | Yes (risk) | |
I | SMT | green | 407 | - | |||
I | SMT | brown | 288 | VIRMA; DBI; DHX29; PCMTD1; RNF7; DBI; MOSPD1; CDKN2C; KANSL1L; CMBL; CAMK2G; DBI; SMARCA2; USF3; TTC3|TTC3P1; PLCD4 | Pathology | Apo-A | - |
I | SMT | cyan | 1279 | C11orf58|SOX6; RASSF8-AS1; CNDP2; AKR7A2; ITIH5; RBM5; DHRS4|DHRS4L2; CLN8; ADAM33; TNIP1; REX1BD; STUB1; EEA1 | Pathology, Insulin, HOMA | Apo-A, HDL-c | - |